SCBMB Curriculum

 

The curriculum is designed to meet the specific needs of students with a bachelor's degree in physics, chemistry, computer science, or engineering. The overall philosophy of the course requirements is to prepare the students in both the specialized areas of research and in cell and molecular biology. All classes must be completed with a grade of B or better.

SCBMB Course Requirements

Graduate School Service Curriculum

Courses available at other institutions:
Rice Course Schedules, UH NSM Course Catalog, and UTHSC Courses


SCBMB Course Requirements

  1. Advanced Topics in SCBMB (311-430) Terms 1, 2, 4
  2. Computational Mathematics for Biomedical Scientists (311-401) Term 2
  3. Molecular Biophysics (Bios 551) Terms 1, 2 at Rice
  4. Seminar in Computational Biology (BIOS 592) Fall/Spring semester at Rice
  5. Science as a Profession (220-513), Term 2
  6. Structural Basis of Human Diseases (311-423J) Term 4
  7. 1 semester computer course at Rice or UH
  8. Electives:
    • Any course in the Graduate School Service Curriculum
    • Electron Cryomicroscopy for Molecules and Cells (311-410 taught in Term 4 odd years only)
    • Advanced X-ray Crystallography (311-403 taught in Term 4 even years only)
    • Computational Molecular Biophysics and Structural Biology (311-402) Terms 1, 2 at Rice
    • Courses offered at Rice, UH, or UTH as approved by the Directors Course Descriptions

    Note: Courses at Baylor College of Medicine are scheduled in eight-week terms. Courses at The University of Houston (UH), Rice University (Rice), and The University of Texas Health Science Center at Houston (UTHSC) are based on three month semesters.

    Example: The following table is an example of course work for first-year students.
     
    Term 1 Advanced Topics in SCBMB, 311-430 Molecular Biophysics,
    Bios 551 (Rice)
    Seminar in Computational Biology, 311-404 (Rice) Research Rotation, 311-549 Method and Logic, 220-523


    1 or 2 electives
    Term 2 Advanced Topics in SCBMB, 311-430 Molecular Biophysics,
    Bios 551 (Rice)
    Seminar in Computational Biology, 311-404 (Rice) Research Rotation, 311-549 Computational Mathematics for Biomedical Scientists, 311-401

    Science as a Profession, 220-513
    Term 3 Seminar in Computational Biology, 311-404 (Rice) Research Rotation,
    311-549
    1 or 2 electives
    Term 4 Advanced Topics in SCBMB, 311-430 Seminar in Computational Biology, 311-404 (Rice) Structural Basis of Human Diseases, 311-423J Research Rotation, 311-549 Research Design, 220-522

    Elective
    Term 5 Research Rotation,

    311-549
    Elective(s)

    Course Descriptions


    Advanced Topics in Structural and Computational Biology and Molecular Biophysics (311-430)

    SCBMB faculty informs first-year students about their research activities in the first two terms. Advanced SCBMB graduate students present their research in the fourth term. The course is offered once a week for a one-hour credit for each term on Fridays from 12:00 noon to 1:00 p.m. This course allows a broader and more even exposure of our incoming students to the faculty and our senior graduate students. Furthermore, the course provides an opportunity to our senior graduate students to talk to the fellow students and faculty. Offered in Terms 1, 2, and 4.

    No exams are administered for this course. Students will be given a grade of either pass or fail. The program administrator records attendance each week.

    Advanced X-ray Crystallography (311-403)

    Students will learn X-ray crystallography using a “theme” protein, e.g. lysozyme, to understand the principles of X-ray crystallography. This theme protein will be used throughout the course. The course will prepare SCBMB students who come from very diverse backgrounds to understand the power of protein crystallography as an analytical tool to probe the structure-function relationship of proteins and enzymes at the molecular level. Offered in Term 4 (even years only).

    Bioinformatics and Genomic Analysis (310-459J)

    This course is intended to provide a background in the theory and application of standard computational methods for molecular biology research. The topics to be discussed include genetic linkage analysis, sequence comparison, phylogeny, and pattern inference and matching. The course will also address computational issues for the Human Genome Program in the areas of large-scale DNA sequencing, chromosome mapping, and gene recognition.

    Computational Mathematics for Biomedical Scientists (311-401)

    Introduce essential computational and mathematical concepts to students who are interested in computational biology and bioinformatics. It is intended that each of the concepts will be taught in the context of the real biological problems ranging from genomics to structural biophysics. Offered in Term 2.

    Electron Cryomicroscopy for Molecules and Cells (311-410)

    This course is designed to discuss in-depth theoretical and practical techniques in structural biophysics with a particular emphasis on eletron imaging and crystallography. Computer homework will be required. This course will serve the needs of students working in structural biophysics laboratories and will provide a comprehensive base knowledge. Offered in Term 4 (taught odd years only).

    Molecular Biophysics (Bios 551)

    Examination, at an intermediate level, of the interaction of light with matter. Includes UV-visible absorption, natural optical activity, fluorescence, EXAFS, NMR of biomolecules, x-ray diffraction and crystallography, neurtron scattering, electron microscopy, and theoretical protein dynamics. Offered in the fall semester at Rice.

    Structural Basis of Human Diseases (311-423J)

    This course is designed for medical and graduate students to understand the potential use of structural information for solving disease problems and to be aware of the different structural and computational tools. Each 1-hour lecture is taught jointly by two or more instructors who will present the medical problems and the structural approaches towards solving them. Attendance is required for passing the course. Offered in Term 4.

 
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